Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | EDC56_2309 | Not Available | Positive | 2609567 - 2610166 | 22532.9 |
| tetr family transcriptional regulator | EDC56_2310 | Not Available | Negative | 2610200 - 2610685 | 17626.5 |
| uncharacterized protein duf904 | EDC56_2311 | Not Available | Negative | 2611039 - 2611257 | 8298.03 |
| hypothetical protein | EDC56_2312 | Not Available | Positive | 2611586 - 2612080 | 19209.7 |
| cbs domain protein | EDC56_2313 | Not Available | Negative | 2612518 - 2612931 | 15581.0 |
| uncharacterized membrane protein yqae (upf0057 family) | EDC56_2314 | Not Available | Negative | 2613185 - 2613352 | 5926.6 |
| hypothetical protein | EDC56_2315 | Not Available | Positive | 2613436 - 2613588 | 5552.43 |
| helix-turn-helix protein | EDC56_2316 | Not Available | Positive | 2613823 - 2614725 | 34618.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | EDC56_2317 | Not Available | Positive | 2614877 - 2615365 | 17412.6 |
| trna/rrna methyltransferase | EDC56_2318 | Not Available | Positive | 2615405 - 2616097 | 25290.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
