Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2288 | Not Available | Negative | 2584313 - 2586631 | 87396.8 |
| flaa1/epsc-like ndp-sugar epimerase | EDC56_2289 | Not Available | Negative | 2586844 - 2588844 | 72643.8 |
| nucleoside-diphosphate-sugar epimerase | EDC56_2291 | Not Available | Negative | 2589603 - 2590493 | 32022.0 |
| polysaccharide deacetylase | EDC56_2292 | Not Available | Positive | 2590634 - 2591551 | 36277.9 |
| 2-oxoisovalerate dehydrogenase e1 component | EDC56_2293 | Not Available | Positive | 2591548 - 2593482 | 70690.5 |
| transferase family hexapeptide repeat protein | EDC56_2294 | Not Available | Positive | 2593479 - 2594561 | 38995.6 |
| lipopolysaccharide transport system permease protein | EDC56_2295 | Not Available | Positive | 2594599 - 2595366 | 29215.9 |
| lipopolysaccharide transport system atp-binding protein | EDC56_2296 | Not Available | Positive | 2595375 - 2596070 | 25647.4 |
| cdp-glycerol glycerophosphotransferase (tagb/spsb family) | EDC56_2297 | Not Available | Positive | 2596063 - 2598240 | 83853.4 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EDC56_2298 | Not Available | Positive | 2598338 - 2598931 | 22002.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
