Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylated dna repair dioxygenase alkb | EDC56_2278 | Not Available | Positive | 2574233 - 2574859 | 23707.0 |
| 2,4-dienoyl-coa reductase-like nadh-dependent reductase (old yellow enzyme family) | EDC56_2279 | Not Available | Negative | 2574871 - 2576061 | 43548.6 |
| tetr family transcriptional regulator | EDC56_2280 | Not Available | Positive | 2576223 - 2576837 | 22607.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EDC56_2281 | Not Available | Positive | 2576938 - 2577501 | 20862.4 |
| short-subunit dehydrogenase | EDC56_2282 | Not Available | Positive | 2577546 - 2578220 | 24117.9 |
| putrescine transport system substrate-binding protein | EDC56_2283 | Not Available | Negative | 2578298 - 2579401 | 41243.1 |
| glycosyltransferase involved in cell wall biosynthesis | EDC56_2284 | Not Available | Negative | 2579755 - 2580981 | 46063.3 |
| nss family neurotransmitter:na+ symporter | EDC56_2285 | Not Available | Negative | 2581095 - 2582429 | 48921.1 |
| glutathione s-transferase | EDC56_2286 | Not Available | Positive | 2582660 - 2583337 | 26582.6 |
| mechanosensitive ion channel-like protein | EDC56_2287 | Not Available | Negative | 2583339 - 2584304 | 36016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
