Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2258 | Not Available | Negative | 2550228 - 2551019 | 28700.5 |
| hypothetical protein | EDC56_2259 | Not Available | Negative | 2551170 - 2551550 | 14407.1 |
| nitrate reductase (quinol-dependent) transmembrane subunit | EDC56_2260 | Not Available | Negative | 2551729 - 2553597 | 67819.5 |
| nitrate reductase (quinol-dependent) catalytic subunit | EDC56_2261 | Not Available | Negative | 2553656 - 2555839 | 81799.6 |
| putative mfs family arabinose efflux permease | EDC56_2262 | Not Available | Negative | 2556073 - 2557425 | 48498.2 |
| hypothetical protein | EDC56_2263 | Not Available | Negative | 2557507 - 2557629 | 4673.88 |
| membrane fusion protein (multidrug efflux system) | EDC56_2264 | Not Available | Positive | 2557722 - 2558912 | 43619.0 |
| hae1 family hydrophobic/amphiphilic exporter-1 | EDC56_2265 | Not Available | Positive | 2558909 - 2562028 | 112489.0 |
| regulatory inactivation of dnaa hda protein | EDC56_2266 | Not Available | Negative | 2562097 - 2562798 | 25806.0 |
| hypothetical protein | EDC56_2267 | Not Available | Negative | 2562883 - 2564067 | 42533.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
