Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rimj/riml family protein n-acetyltransferase | EDC56_2238 | Not Available | Negative | 2519963 - 2520478 | 19064.0 |
| uncharacterized protein ydiu (upf0061 family) | EDC56_2239 | Not Available | Negative | 2520590 - 2522044 | 53709.4 |
| chitin binding protein | EDC56_2240 | Not Available | Negative | 2522318 - 2523004 | 25005.0 |
| subtilisin family serine protease | EDC56_2241 | Not Available | Negative | 2523524 - 2525692 | 77545.6 |
| uncharacterized protein duf4136 | EDC56_2242 | Not Available | Negative | 2525976 - 2526608 | 22838.1 |
| transcriptional regulator with xre-family hth domain | EDC56_2243 | Not Available | Negative | 2527074 - 2527877 | 30251.8 |
| dihydroflavonol-4-reductase | EDC56_2244 | Not Available | Positive | 2528054 - 2529040 | 35708.1 |
| chitinase | EDC56_2245 | Not Available | Positive | 2529669 - 2531390 | 62293.9 |
| rhomboid family protein | EDC56_2246 | Not Available | Negative | 2531501 - 2532046 | 19506.5 |
| atpase family protein associated with various cellular activities (aaa) | EDC56_2247 | Not Available | Negative | 2532081 - 2537381 | 200155.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
