Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver modulated diguanylate cyclase | EDC56_0144 | Not Available | Negative | 168026 - 168931 | 33604.8 |
| tetr family transcriptional regulator | EDC56_0145 | Not Available | Positive | 169556 - 170191 | 23787.7 |
| peroxiredoxin q/bcp | EDC56_0146 | Not Available | Negative | 170269 - 170757 | 17904.4 |
| tetratricopeptide repeat protein | EDC56_0147 | Not Available | Positive | 170930 - 171397 | 17451.9 |
| hypothetical protein | EDC56_0148 | Not Available | Positive | 171402 - 171773 | 14207.2 |
| adp-ribose pyrophosphatase yjhb (nudix family) | EDC56_0149 | Not Available | Negative | 171823 - 172380 | 20997.8 |
| flavin reductase (dim6/ntab) family nadh-fmn oxidoreductase rutf | EDC56_0150 | Not Available | Negative | 172585 - 173061 | 17191.4 |
| molybdopterin synthase subunit moae | EDC56_0151 | Not Available | Negative | 173242 - 173721 | 17919.0 |
| molybdopterin synthase subunit moad | EDC56_0152 | Not Available | Negative | 173724 - 173975 | 8963.77 |
| cyclic pyranopterin monophosphate synthase subunit moac | EDC56_0153 | Not Available | Negative | 173972 - 174457 | 17002.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
