Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2195 | Not Available | Negative | 2461570 - 2462136 | 22115.1 |
| hypothetical protein | EDC56_2196 | Not Available | Negative | 2462510 - 2463550 | 39417.6 |
| sterol desaturase/sphingolipid hydroxylase (fatty acid hydroxylase superfamily) | EDC56_2197 | Not Available | Negative | 2463628 - 2464440 | 31547.3 |
| tetr family transcriptional regulator | EDC56_2198 | Not Available | Positive | 2464647 - 2465303 | 23491.2 |
| hypothetical protein | EDC56_2199 | Not Available | Positive | 2465398 - 2465703 | 11535.9 |
| putative mfs family arabinose efflux permease | EDC56_2200 | Not Available | Positive | 2466026 - 2468611 | 93159.6 |
| opacity protein-like surface antigen | EDC56_2201 | Not Available | Positive | 2469019 - 2469741 | 26979.8 |
| putative outer membrane protein | EDC56_2202 | Not Available | Positive | 2470376 - 2471005 | 22977.4 |
| opacity protein-like surface antigen | EDC56_2203 | Not Available | Positive | 2471340 - 2471966 | 22709.8 |
| putative outer membrane protein | EDC56_2204 | Not Available | Positive | 2472284 - 2472910 | 22594.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
