Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | EDC56_2185 | Not Available | Positive | 2453969 - 2454727 | 28207.0 |
| gmp synthase-like glutamine amidotransferase | EDC56_2186 | Not Available | Positive | 2454955 - 2455668 | 26666.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDC56_2187 | Not Available | Negative | 2455756 - 2456517 | 26986.9 |
| hxlr family transcriptional regulator | EDC56_2188 | Not Available | Positive | 2456627 - 2456965 | 13128.7 |
| duf3010 family protein | EDC56_2189 | Not Available | Positive | 2457077 - 2457502 | 15923.5 |
| hypothetical protein | EDC56_2190 | Not Available | Positive | 2457688 - 2457831 | 5228.31 |
| hypothetical protein | EDC56_2191 | Not Available | Negative | 2457926 - 2458765 | 32403.3 |
| rio kinase 1 | EDC56_2192 | Not Available | Positive | 2458948 - 2459829 | 32800.5 |
| phzf family phenazine biosynthesis protein | EDC56_2193 | Not Available | Negative | 2459973 - 2460767 | 29300.9 |
| trna(leu) c34 or u34 (ribose-2'-o)-methylase trml | EDC56_2194 | Not Available | Negative | 2460869 - 2461384 | 18704.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
