Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| padr family transcriptional regulator | EDC56_2175 | Not Available | Negative | 2442355 - 2442912 | 21269.7 |
| all-trans-retinol 13,14-reductase | EDC56_2176 | Not Available | Positive | 2443050 - 2444675 | 61200.1 |
| hypothetical protein | EDC56_2177 | Not Available | Positive | 2444848 - 2445075 | 8357.35 |
| secondary thiamine-phosphate synthase enzyme | EDC56_2178 | Not Available | Negative | 2445147 - 2445575 | 16245.3 |
| polyketide cyclase/dehydrase/lipid transport protein | EDC56_2179 | Not Available | Positive | 2445744 - 2446277 | 20268.4 |
| citronellyl-coa dehydrogenase | EDC56_2180 | Not Available | Negative | 2446317 - 2447474 | 42487.2 |
| geranyl-coa carboxylase alpha subunit | EDC56_2181 | Not Available | Negative | 2447564 - 2449576 | 72171.6 |
| isohexenylglutaconyl-coa hydratase | EDC56_2182 | Not Available | Negative | 2449573 - 2450418 | 30279.5 |
| geranyl-coa carboxylase beta subunit | EDC56_2183 | Not Available | Negative | 2450457 - 2452073 | 57805.0 |
| uncharacterized protein duf1446 | EDC56_2184 | Not Available | Negative | 2452078 - 2453907 | 64811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
