Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| taurine transport system atp-binding protein | EDC56_2155 | Not Available | Negative | 2420291 - 2421130 | 30794.5 |
| taurine transport system substrate-binding protein | EDC56_2156 | Not Available | Negative | 2421170 - 2422192 | 37378.0 |
| gntr family transcriptional regulator | EDC56_2157 | Not Available | Positive | 2422522 - 2424006 | 56063.1 |
| lipid a ethanolaminephosphotransferase | EDC56_2158 | Not Available | Negative | 2424076 - 2425701 | 61325.3 |
| opacity protein-like surface antigen | EDC56_2159 | Not Available | Positive | 2426249 - 2426818 | 20435.0 |
| dna-binding transcriptional lysr family regulator | EDC56_2160 | Not Available | Negative | 2426889 - 2427776 | 32491.9 |
| acetyl esterase/lipase | EDC56_2161 | Not Available | Negative | 2427860 - 2428786 | 33698.6 |
| uncharacterized membrane protein ykva (duf1232 family) | EDC56_2162 | Not Available | Negative | 2428858 - 2429196 | 12521.0 |
| xanthine dehydrogenase accessory factor | EDC56_2163 | Not Available | Negative | 2429333 - 2430307 | 35160.2 |
| hypothetical protein | EDC56_2164 | Not Available | Negative | 2430663 - 2430812 | 5364.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
