Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_2135 | Not Available | Negative | 2390653 - 2391285 | 23621.2 |
| putative cardiolipin synthase | EDC56_2136 | Not Available | Positive | 2391611 - 2393104 | 56664.8 |
| pgap1-like protein | EDC56_2137 | Not Available | Negative | 2393196 - 2395319 | 76658.4 |
| d-glycerate 3-kinase | EDC56_2138 | Not Available | Negative | 2395892 - 2396836 | 35535.2 |
| lactaldehyde dehydrogenase/sulfoacetaldehyde dehydrogenase | EDC56_2139 | Not Available | Negative | 2396922 - 2398292 | 48844.6 |
| putative membrane protein yfca | EDC56_2140 | Not Available | Negative | 2398315 - 2399085 | 28457.5 |
| beta-alanine--pyruvate transaminase | EDC56_2141 | Not Available | Positive | 2399261 - 2400565 | 47397.7 |
| dna-binding transcriptional mocr family regulator | EDC56_2142 | Not Available | Negative | 2400690 - 2401829 | 41236.7 |
| arac family transcriptional regulator | EDC56_2143 | Not Available | Positive | 2401975 - 2402847 | 33034.7 |
| concanavalin a-like lectin/glucanase superfamily protein | EDC56_2144 | Not Available | Negative | 2402962 - 2404959 | 73731.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
