Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetaldehyde dehydrogenase | EDC56_2125 | Not Available | Positive | 2380431 - 2381342 | 31855.6 |
| 4-hydroxy-2-oxovalerate aldolase | EDC56_2126 | Not Available | Positive | 2381380 - 2382408 | 36808.6 |
| lvivd repeat-containing protein | EDC56_2127 | Not Available | Negative | 2382518 - 2384275 | 65735.4 |
| aminocarboxymuconate-semialdehyde decarboxylase | EDC56_2128 | Not Available | Negative | 2384311 - 2385309 | 37422.0 |
| 3-hydroxyanthranilate 3,4-dioxygenase | EDC56_2129 | Not Available | Negative | 2385313 - 2385828 | 19746.5 |
| 2-aminomuconate deaminase | EDC56_2130 | Not Available | Negative | 2385854 - 2386288 | 15769.6 |
| 2-oxo-3-hexenedioate decarboxylase | EDC56_2131 | Not Available | Negative | 2386320 - 2387102 | 27665.1 |
| 2-keto-4-pentenoate hydratase | EDC56_2132 | Not Available | Negative | 2387123 - 2387908 | 27741.4 |
| aminomuconate-semialdehyde/2-hydroxymuconate-6- semialdehyde dehydrogenase | EDC56_2133 | Not Available | Negative | 2387936 - 2389441 | 53626.4 |
| lysr family transcriptional regulator | EDC56_2134 | Not Available | Positive | 2389670 - 2390635 | 35100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
