Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroneopterin aldolase | EDC56_2115 | Not Available | Negative | 2367719 - 2368075 | 13303.1 |
| o-sialoglycoprotein endopeptidase | EDC56_2116 | Not Available | Negative | 2368100 - 2369146 | 37094.8 |
| ssu ribosomal protein s21p | EDC56_2117 | Not Available | Positive | 2369382 - 2369597 | 8536.53 |
| hypothetical protein | EDC56_2118 | Not Available | Positive | 2369710 - 2370156 | 16357.1 |
| dna primase | EDC56_2119 | Not Available | Positive | 2370163 - 2372259 | 78207.1 |
| rna polymerase rpod-like sigma 70 subunit | EDC56_2120 | Not Available | Positive | 2372403 - 2374202 | 68671.7 |
| Trna-met | Not Available | Not Available | Positive | 2374314 - 2374390 | Not Available |
| iron complex outermembrane receptor protein | EDC56_2122 | Not Available | Negative | 2374774 - 2377089 | 84255.5 |
| nss family neurotransmitter:na+ symporter | EDC56_2123 | Not Available | Negative | 2377377 - 2378753 | 49071.0 |
| kynureninase | EDC56_2124 | Not Available | Negative | 2378853 - 2380097 | 45762.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
