Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit yajc | EDC56_0135 | Not Available | Negative | 160199 - 160531 | 12064.9 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 161088 - 161203 | Not Available |
| exodeoxyribonuclease-3 | EDC56_0136 | Not Available | Negative | 160623 - 161396 | 29149.1 |
| uncharacterized protein duf4126 | EDC56_0137 | Not Available | Negative | 161474 - 162259 | 27616.0 |
| meso-butanediol dehydrogenase/(s,s)-butanediol dehydrogenase/diacetyl reductase | EDC56_0138 | Not Available | Negative | 162326 - 163075 | 25787.8 |
| uncharacterized protein (tigr03790 family) | EDC56_0139 | Not Available | Positive | 163238 - 164497 | 47260.6 |
| succinate dehydrogenase/fumarate reductase flavoprotein subunit | EDC56_0140 | Not Available | Positive | 164528 - 166006 | 52788.4 |
| snoal-like protein | EDC56_0141 | Not Available | Negative | 166079 - 166525 | 16871.1 |
| hypothetical protein | EDC56_0142 | Not Available | Negative | 166562 - 167434 | 33782.1 |
| chey-like chemotaxis protein | EDC56_0143 | Not Available | Negative | 167544 - 167918 | 13633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
