Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna gm-2251 2'-o-methyltransferase | EDC56_2105 | Not Available | Negative | 2353213 - 2353950 | 26418.2 |
| rnase r | EDC56_2106 | Not Available | Negative | 2353950 - 2356586 | 99835.9 |
| nnp family nitrate/nitrite transporter-like mfs transporter | EDC56_2107 | Not Available | Positive | 2357123 - 2358589 | 52535.3 |
| 2-isopropylmalate synthase | EDC56_2108 | Not Available | Positive | 2359159 - 2360847 | 62181.1 |
| sodium/proton antiporter (cpa1 family) | EDC56_2109 | Not Available | Positive | 2361013 - 2362305 | 47043.7 |
| isocitrate lyase | EDC56_2110 | Not Available | Negative | 2362721 - 2364304 | 58416.8 |
| hypothetical protein | EDC56_2111 | Not Available | Negative | 2364517 - 2365596 | 39323.7 |
| hypothetical protein | EDC56_2112 | Not Available | Negative | 2365709 - 2366116 | 15340.9 |
| pteridine reductase | EDC56_2113 | Not Available | Positive | 2366466 - 2367209 | 27066.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | EDC56_2114 | Not Available | Negative | 2367206 - 2367718 | 18704.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
