Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter membrane protein | EDC56_2095 | Not Available | Negative | 2344991 - 2345959 | 33005.3 |
| ribose abc transporter atp-binding protein | EDC56_2096 | Not Available | Negative | 2345980 - 2347470 | 54490.8 |
| ribose transport protein rbsd | EDC56_2097 | Not Available | Negative | 2347470 - 2347877 | 14731.1 |
| threonine/homoserine/homoserine lactone efflux protein | EDC56_2098 | Not Available | Positive | 2348466 - 2349083 | 22110.6 |
| replicative dna helicase | EDC56_2099 | Not Available | Negative | 2349163 - 2350602 | 52772.5 |
| hypothetical protein | EDC56_2100 | Not Available | Positive | 2350642 - 2350854 | 8031.77 |
| large subunit ribosomal protein l9 | EDC56_2101 | Not Available | Negative | 2350829 - 2351275 | 15331.2 |
| hypothetical protein | EDC56_2102 | Not Available | Negative | 2351343 - 2352221 | 31775.3 |
| ssu ribosomal protein s18p | EDC56_2103 | Not Available | Negative | 2352267 - 2352497 | 8915.87 |
| small subunit ribosomal protein s6 | EDC56_2104 | Not Available | Negative | 2352547 - 2352972 | 16097.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
