Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate export protein | EDC56_2085 | Not Available | Positive | 2330517 - 2331731 | 44234.8 |
| hypothetical protein | EDC56_2086 | Not Available | Positive | 2331948 - 2332880 | 35398.0 |
| enhancing lycopene biosynthesis protein 2 | EDC56_2087 | Not Available | Negative | 2333022 - 2333681 | 22776.3 |
| arac family transcriptional regulator | EDC56_2088 | Not Available | Negative | 2333782 - 2334588 | 30869.1 |
| porin-like protein | EDC56_2089 | Not Available | Negative | 2334794 - 2335786 | 35777.7 |
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | EDC56_2090 | Not Available | Negative | 2335930 - 2340282 | 158199.0 |
| pbp family phospholipid-binding protein | EDC56_2091 | Not Available | Negative | 2340660 - 2341214 | 19427.0 |
| 4'-phosphopantetheinyl transferase entd | EDC56_2092 | Not Available | Positive | 2341486 - 2342226 | 27687.2 |
| ribokinase | EDC56_2093 | Not Available | Negative | 2343122 - 2344036 | 31106.2 |
| ribose-binding protein | EDC56_2094 | Not Available | Negative | 2344036 - 2344956 | 31317.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
