Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | EDC56_2075 | Not Available | Negative | 2314738 - 2315928 | 42642.3 |
| transcriptional repressor nrdr | EDC56_2076 | Not Available | Negative | 2315921 - 2316502 | 22137.6 |
| serine hydroxymethyltransferase | EDC56_2077 | Not Available | Negative | 2316563 - 2317822 | 45066.6 |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s) | EDC56_2078 | Not Available | Negative | 2317983 - 2321408 | 127798.0 |
| atp-binding cassette chvd family protein | EDC56_2079 | Not Available | Positive | 2321736 - 2323400 | 62058.7 |
| 3beta-hydroxy-delta5-steroid dehydrogenase/steroid delta-isomerase | EDC56_2080 | Not Available | Negative | 2323415 - 2324479 | 38924.8 |
| dna repair protein rada/sms | EDC56_2081 | Not Available | Negative | 2324594 - 2325964 | 48398.7 |
| hypothetical protein | EDC56_2082 | Not Available | Positive | 2326251 - 2327615 | 52318.2 |
| hypothetical protein | EDC56_2083 | Not Available | Positive | 2327671 - 2328201 | 20330.1 |
| nnp family nitrate/nitrite transporter-like mfs transporter | EDC56_2084 | Not Available | Positive | 2328510 - 2329982 | 53421.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
