Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | EDC56_2055 | Not Available | Positive | 2294403 - 2296274 | 67514.0 |
| gtp cyclohydrolase ii | EDC56_2056 | Not Available | Negative | 2296335 - 2296925 | 21701.2 |
| aspartyl protease family protein | EDC56_2057 | Not Available | Negative | 2297027 - 2297698 | 23557.9 |
| kdo2-lipid iv(a) lauroyltransferase | EDC56_2058 | Not Available | Positive | 2297923 - 2298774 | 32412.2 |
| opacity protein-like surface antigen | EDC56_2059 | Not Available | Positive | 2299078 - 2299713 | 22629.7 |
| thiamine-phosphate diphosphorylase | EDC56_2060 | Not Available | Negative | 2299818 - 2301332 | 53091.4 |
| thiazole synthase | EDC56_2061 | Not Available | Negative | 2301361 - 2302161 | 28318.1 |
| sulfur carrier protein | EDC56_2062 | Not Available | Negative | 2302163 - 2302369 | 7313.79 |
| glycine oxidase | EDC56_2063 | Not Available | Negative | 2302394 - 2303509 | 40849.0 |
| phosphomethylpyrimidine synthase | EDC56_2064 | Not Available | Negative | 2303600 - 2305504 | 70513.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
