Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | Positive | 2284715 - 2284791 | Not Available |
| dna-binding xre family transcriptional regulator | EDC56_2046 | Not Available | Positive | 2284972 - 2285814 | 31786.9 |
| methyltransferase family protein | EDC56_2047 | Not Available | Positive | 2285848 - 2286534 | 26626.4 |
| hypothetical protein | EDC56_2048 | Not Available | Negative | 2286655 - 2286942 | 10849.5 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | EDC56_2049 | Not Available | Negative | 2287195 - 2288955 | 63078.4 |
| dna polymerase-2 | EDC56_2050 | Not Available | Positive | 2289478 - 2291934 | 94186.4 |
| hypothetical protein | EDC56_2051 | Not Available | Positive | 2292083 - 2292574 | 17863.2 |
| exodeoxyribonuclease vii small subunit | EDC56_2052 | Not Available | Positive | 2293105 - 2293347 | 9155.52 |
| farnesyl diphosphate synthase/geranylgeranyl diphosphate synthase type ii | EDC56_2053 | Not Available | Positive | 2293344 - 2294261 | 33072.5 |
| hypothetical protein | EDC56_2054 | Not Available | Negative | 2294166 - 2294387 | 7493.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
