Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| o-methyltransferase | EDC56_2035 | Not Available | Positive | 2274030 - 2275205 | 44012.0 |
| phosphopantetheinyl transferase | EDC56_2036 | Not Available | Positive | 2275190 - 2275966 | 29018.6 |
| yeca family protein | EDC56_2037 | Not Available | Positive | 2276093 - 2277475 | 51325.1 |
| atp-dependent rna helicase rhle | EDC56_2038 | Not Available | Positive | 2277688 - 2279142 | 52965.1 |
| uncharacterized protein (tigr00369 family) | EDC56_2039 | Not Available | Positive | 2279303 - 2279782 | 17646.3 |
| hypothetical protein | EDC56_2040 | Not Available | Positive | 2280098 - 2280262 | 6170.22 |
| uncharacterized protein duf2804 | EDC56_2041 | Not Available | Positive | 2280459 - 2281487 | 38428.2 |
| isocitrate dehydrogenase kinase/phosphatase | EDC56_2042 | Not Available | Positive | 2281581 - 2283317 | 67150.3 |
| asma-like protein | EDC56_2043 | Not Available | Positive | 2283659 - 2284456 | 29268.0 |
| Trna-asp | Not Available | Not Available | Positive | 2284553 - 2284629 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
