Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_0125 | Not Available | Positive | 147112 - 147819 | 25746.4 |
| atpase subunit of abc transporter with duplicated atpase domains | EDC56_0126 | Not Available | Positive | 148138 - 149715 | 59012.1 |
| atp-binding cassette subfamily b protein | EDC56_0127 | Not Available | Positive | 150142 - 151956 | 66896.0 |
| silicon transporter | EDC56_0128 | Not Available | Negative | 152064 - 153566 | 56692.6 |
| hypothetical protein | EDC56_0129 | Not Available | Positive | 153597 - 153803 | 7559.58 |
| hypothetical protein | EDC56_0130 | Not Available | Negative | 153839 - 154210 | 14213.8 |
| putative porin | EDC56_0131 | Not Available | Negative | 154381 - 155496 | 41965.2 |
| inner membrane protein | EDC56_0132 | Not Available | Negative | 155979 - 156494 | 19299.9 |
| agcs family alanine or glycine:cation symporter | EDC56_0133 | Not Available | Negative | 156979 - 158322 | 46848.2 |
| putative protease | EDC56_0134 | Not Available | Negative | 158584 - 159990 | 52125.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
