Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sinobacterium caligoides strain DSM 100316
Accession NumberRKHR00000000.1
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Tail tube protein | EDC56_1218 | Not Available | - | 1394642 - 1395142 | 17942.8 |
| Putative tail sheath protein | EDC56_1219 | Not Available | - | 1395139 - 1396518 | 49983.8 |
| Virion structural protein | EDC56_1220 | Not Available | - | 1396608 - 1399088 | 88055.6 |
| Tail fibers protein | EDC56_1221 | Not Available | - | 1399134 - 1400060 | 34661.8 |
| Baseplate assembly protein j | EDC56_1222 | Not Available | - | 1400063 - 1400971 | 33471.4 |
| Gp39, phage baseplate assembly protein | EDC56_1223 | Not Available | - | 1401015 - 1401923 | 33975.3 |
| Baseplate assembly protein | EDC56_1224 | Not Available | - | 1401968 - 1402312 | 12767.6 |
| Attl | Not Available | Not Available | + | 1428812 - 1428834 | Not Available |
| Hypothetical protein | EDC56_1247 | Not Available | - | 1430345 - 1430863 | 18988.8 |
| hypothetical protein | EDC56_1248 | Not Available | - | 1430847 - 1431203 | 12755.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.