Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic nitrate reductase subunit napc | EDC56_2005 | Not Available | Positive | 2245825 - 2246412 | 22466.8 |
| pot family proton-dependent oligopeptide transporter | EDC56_2006 | Not Available | Negative | 2246823 - 2248313 | 53814.5 |
| radical sam family protein | EDC56_2007 | Not Available | Positive | 2249112 - 2249996 | 33163.2 |
| putative mfs family arabinose efflux permease | EDC56_2008 | Not Available | Positive | 2250000 - 2251211 | 43144.7 |
| hypothetical protein | EDC56_2009 | Not Available | Positive | 2251264 - 2251644 | 14223.1 |
| atp adenylyltransferase | EDC56_2010 | Not Available | Negative | 2251888 - 2252769 | 31742.8 |
| trna (cmo5u34)-methyltransferase | EDC56_2011 | Not Available | Positive | 2253076 - 2253807 | 26749.1 |
| trna (mo5u34)-methyltransferase | EDC56_2012 | Not Available | Positive | 2253804 - 2254778 | 37170.3 |
| hypothetical protein | EDC56_2013 | Not Available | Positive | 2255058 - 2255150 | 3297.15 |
| phospholipase a1 | EDC56_2014 | Not Available | Negative | 2255227 - 2256267 | 39709.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
