Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murnac alpha-1-phosphate uridylyltransferase | EDC56_1985 | Not Available | Negative | 2220947 - 2221615 | 23832.8 |
| hypothetical protein | EDC56_1986 | Not Available | Negative | 2221612 - 2222613 | 37856.2 |
| lps-assembly protein | EDC56_1987 | Not Available | Positive | 2222791 - 2225544 | 102041.0 |
| peptidyl-prolyl cis-trans isomerase sura | EDC56_1988 | Not Available | Positive | 2225534 - 2226844 | 48929.6 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | EDC56_1989 | Not Available | Positive | 2226845 - 2227837 | 35549.9 |
| dimethyladenosine transferase | EDC56_1990 | Not Available | Positive | 2227908 - 2228741 | 31214.7 |
| apag protein | EDC56_1991 | Not Available | Positive | 2228810 - 2229181 | 13738.1 |
| bis(5'nucleosyl)-tetraphosphatase apah | EDC56_1992 | Not Available | Positive | 2229202 - 2230014 | 30875.2 |
| putative serine protein kinase prka | EDC56_1993 | Not Available | Positive | 2230422 - 2232344 | 73852.3 |
| hypothetical protein | EDC56_1994 | Not Available | Positive | 2232358 - 2233656 | 49660.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
