Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbd | EDC56_1965 | Not Available | Positive | 2198788 - 2200551 | 63485.8 |
| 3-dehydroquinate dehydratase | EDC56_1966 | Not Available | Positive | 2200823 - 2201263 | 15990.2 |
| acetyl-coa carboxylase biotin carboxyl carrier protein | EDC56_1967 | Not Available | Positive | 2201305 - 2201760 | 15646.7 |
| acetyl-coa carboxylase biotin carboxylase subunit | EDC56_1968 | Not Available | Positive | 2201788 - 2203128 | 48892.6 |
| ribosomal protein l11 methyltransferase | EDC56_1969 | Not Available | Positive | 2203313 - 2204221 | 33550.9 |
| putative zn finger-like uncharacterized protein | EDC56_1970 | Not Available | Positive | 2204315 - 2205508 | 43874.7 |
| pp_01918 | EDC56_1971 | Not Available | Positive | 2205703 - 2206674 | Not Available |
| dna-binding protein fis | EDC56_1972 | Not Available | Positive | 2206685 - 2206999 | 11623.9 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | EDC56_1973 | Not Available | Positive | 2207110 - 2208678 | 56151.6 |
| phosphoribosylamine--glycine ligase | EDC56_1974 | Not Available | Positive | 2208800 - 2210095 | 45937.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
