Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding ntrc family response regulator | EDC56_1945 | Not Available | Negative | 2176378 - 2177748 | 50377.9 |
| exopolysaccharide biosynthesis wecb/taga/cpsf family protein | EDC56_1946 | Not Available | Positive | 2178176 - 2179675 | 57318.3 |
| glycosyltransferase involved in cell wall biosynthesis | EDC56_1947 | Not Available | Positive | 2179859 - 2181148 | 48676.8 |
| glycosyltransferase involved in cell wall biosynthesis | EDC56_1948 | Not Available | Positive | 2181216 - 2182388 | 45044.8 |
| putative alkp superfamily pyrophosphatase or phosphodiesterase | EDC56_1949 | Not Available | Positive | 2182496 - 2183656 | 45511.9 |
| uncharacterized protein involved in exopolysaccharide biosynthesis | EDC56_1950 | Not Available | Positive | 2183669 - 2185660 | 76306.5 |
| polysaccharide export outer membrane protein | EDC56_1951 | Not Available | Positive | 2185638 - 2186741 | 41235.1 |
| o-antigen ligase-like membrane protein | EDC56_1952 | Not Available | Positive | 2186770 - 2188560 | 69027.4 |
| o-antigen/teichoic acid export membrane protein | EDC56_1953 | Not Available | Positive | 2188557 - 2190107 | 58159.4 |
| rhamnosyltransferase | EDC56_1954 | Not Available | Negative | 2190140 - 2191036 | 34208.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
