Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter tatt component family protein | EDC56_1935 | Not Available | Negative | 2166718 - 2167569 | 30629.4 |
| hypothetical protein | EDC56_1936 | Not Available | Positive | 2167796 - 2168011 | 8293.44 |
| hypothetical protein | EDC56_1937 | Not Available | Negative | 2168017 - 2168265 | 9272.45 |
| hypothetical protein | EDC56_1938 | Not Available | Positive | 2168404 - 2170104 | 61897.1 |
| hypothetical protein | EDC56_1939 | Not Available | Positive | 2170389 - 2170586 | 7183.54 |
| amino acid/polyamine/organocation transporter (apc superfamily) | EDC56_1940 | Not Available | Negative | 2170688 - 2172097 | 50085.4 |
| succinate-semialdehyde dehydrogenase/glutarate-semialdehyde dehydrogenase | EDC56_1941 | Not Available | Negative | 2172313 - 2173776 | 51413.4 |
| dna-binding transcriptional lysr family regulator | EDC56_1942 | Not Available | Positive | 2173879 - 2174802 | 34415.5 |
| uncharacterized protein duf4136 | EDC56_1943 | Not Available | Positive | 2175011 - 2175562 | 19801.5 |
| uncharacterized protein duf4136 | EDC56_1944 | Not Available | Negative | 2175650 - 2176213 | 20439.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
