Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multiple antibiotic resistance protein | EDC56_1925 | Not Available | Positive | 2153714 - 2154304 | 21702.6 |
| peroxiredoxin | EDC56_1926 | Not Available | Negative | 2154386 - 2154865 | 16786.5 |
| hypothetical protein | EDC56_1927 | Not Available | Negative | 2154967 - 2155293 | 12221.6 |
| iron complex outermembrane receptor protein | EDC56_1928 | Not Available | Positive | 2155995 - 2158523 | 91513.0 |
| hypothetical protein | EDC56_1929 | Not Available | Negative | 2158618 - 2159016 | 15362.2 |
| multidrug efflux pump | EDC56_1930 | Not Available | Negative | 2159153 - 2162206 | 110262.0 |
| membrane fusion protein (multidrug efflux system) | EDC56_1931 | Not Available | Negative | 2162216 - 2163304 | 39179.1 |
| tripartite atp-independent transporter dctm subunit | EDC56_1932 | Not Available | Negative | 2163799 - 2165076 | 46285.0 |
| trap-type c4-dicarboxylate transport system permease small subunit | EDC56_1933 | Not Available | Negative | 2165073 - 2165558 | 17997.6 |
| trap-type c4-dicarboxylate transport system substrate-binding protein | EDC56_1934 | Not Available | Negative | 2165614 - 2166639 | 37059.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
