Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | EDC56_1905 | Not Available | Negative | 2125877 - 2127067 | 42794.4 |
| asnc family transcriptional regulator | EDC56_1906 | Not Available | Positive | 2127355 - 2127774 | 15377.7 |
| glutamine synthetase | EDC56_1907 | Not Available | Negative | 2127852 - 2129234 | 50723.5 |
| putrescine aminotransferase | EDC56_1908 | Not Available | Positive | 2129441 - 2130805 | 50074.3 |
| dienelactone hydrolase | EDC56_1909 | Not Available | Negative | 2130916 - 2131668 | 26745.3 |
| peptide/nickel transport system atp-binding protein/oligopeptide transport system atp-binding protein | EDC56_1910 | Not Available | Negative | 2131789 - 2132787 | 37138.9 |
| oligopeptide transport system atp-binding protein | EDC56_1911 | Not Available | Negative | 2132784 - 2133821 | 37360.1 |
| oligopeptide transport system permease protein | EDC56_1912 | Not Available | Negative | 2133821 - 2135227 | 50774.2 |
| oligopeptide transport system permease protein | EDC56_1913 | Not Available | Negative | 2135227 - 2136159 | 34281.9 |
| oligopeptide transport system substrate-binding protein | EDC56_1914 | Not Available | Negative | 2136163 - 2137851 | 63778.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
