Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa:carnitine coa-transferase caib-like acyl-coa transferase | EDC56_1895 | Not Available | Negative | 2114197 - 2115396 | 43267.6 |
| glutaryl-coa dehydrogenase | EDC56_1896 | Not Available | Negative | 2115442 - 2116647 | 44298.1 |
| hypothetical protein | EDC56_1897 | Not Available | Negative | 2116741 - 2117130 | 14583.3 |
| glucose-6-phosphate isomerase | EDC56_1898 | Not Available | Negative | 2117313 - 2118833 | 56867.6 |
| udp-glucose pyrophosphorylase | EDC56_1899 | Not Available | Negative | 2118881 - 2119750 | 31626.4 |
| dna-binding transcriptional lysr family regulator | EDC56_1900 | Not Available | Positive | 2119945 - 2120826 | 32436.9 |
| regulatory luxr family protein | EDC56_1901 | Not Available | Positive | 2120936 - 2121769 | 31264.3 |
| kelch motif protein | EDC56_1902 | Not Available | Negative | 2121841 - 2122905 | 39270.4 |
| arsr family transcriptional regulator | EDC56_1903 | Not Available | Negative | 2123031 - 2123318 | 10799.4 |
| signal transduction histidine kinase | EDC56_1904 | Not Available | Positive | 2123364 - 2125853 | 92791.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
