Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EDC56_1874 | Not Available | Negative | 2091945 - 2092835 | 34064.8 |
| hypothetical protein | EDC56_1875 | Not Available | Negative | 2092992 - 2093570 | 21284.9 |
| dha1 family bicyclomycin/chloramphenicol resistance-like mfs transporter | EDC56_1876 | Not Available | Negative | 2093664 - 2094893 | 44059.4 |
| hypothetical protein | EDC56_1877 | Not Available | Negative | 2095010 - 2096530 | 53742.0 |
| adp-ribose pyrophosphatase yjhb (nudix family) | EDC56_1878 | Not Available | Positive | 2096671 - 2097171 | 18018.3 |
| hypothetical protein | EDC56_1879 | Not Available | Negative | 2097196 - 2098137 | 35679.9 |
| zn-dependent protease | EDC56_1880 | Not Available | Positive | 2098408 - 2099496 | 40066.4 |
| trk system potassium uptake protein trkh | EDC56_1881 | Not Available | Positive | 2099598 - 2101115 | 55428.0 |
| duf2959 family protein | EDC56_1882 | Not Available | Negative | 2101205 - 2101879 | 24595.0 |
| putative patatin/cpla2 family phospholipase | EDC56_1883 | Not Available | Positive | 2102076 - 2103134 | 39794.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
