Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal small subunit pseudouridine synthase a | EDC56_1854 | Not Available | Negative | 2064401 - 2065090 | 25840.6 |
| small conductance mechanosensitive channel | EDC56_1855 | Not Available | Negative | 2065151 - 2066782 | 60581.7 |
| pyruvate kinase | EDC56_1856 | Not Available | Negative | 2067211 - 2068761 | 55497.6 |
| glyceraldehyde 3-phosphate dehydrogenase | EDC56_1857 | Not Available | Negative | 2068748 - 2069779 | 37254.2 |
| 2-keto-3-deoxy-phosphogluconate aldolase | EDC56_1858 | Not Available | Negative | 2069946 - 2070581 | 22045.8 |
| hypothetical protein | EDC56_1859 | Not Available | Negative | 2070578 - 2070793 | 7736.17 |
| 6-phosphogluconolactonase | EDC56_1860 | Not Available | Negative | 2070768 - 2071469 | 25478.1 |
| glucose-6-phosphate 1-dehydrogenase | EDC56_1861 | Not Available | Negative | 2071469 - 2072941 | 55019.7 |
| 6-phosphogluconate dehydratase | EDC56_1862 | Not Available | Negative | 2073038 - 2074846 | 64431.6 |
| glucose-6-phosphate isomerase | EDC56_1863 | Not Available | Negative | 2074955 - 2076610 | 61797.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
