Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EDC56_1844 | Not Available | Negative | 2055344 - 2055628 | 10502.0 |
| signal transduction histidine kinase | EDC56_1845 | Not Available | Negative | 2055659 - 2058124 | 92143.6 |
| biopolymer transport protein exbd | EDC56_1846 | Not Available | Positive | 2058948 - 2059358 | 15160.1 |
| hypothetical protein | EDC56_1847 | Not Available | Positive | 2059506 - 2060471 | 36231.9 |
| hypothetical protein | EDC56_1848 | Not Available | Negative | 2060531 - 2060989 | 16896.6 |
| regulator of protease activity hflc (stomatin/prohibitin superfamily) | EDC56_1849 | Not Available | Negative | 2060995 - 2061924 | 33497.7 |
| hypothetical protein | EDC56_1850 | Not Available | Positive | 2062260 - 2062508 | 9751.15 |
| aquaporin z | EDC56_1851 | Not Available | Negative | 2062575 - 2063276 | 23785.5 |
| hypothetical protein | EDC56_1852 | Not Available | Negative | 2063431 - 2063586 | 5877.43 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | EDC56_1853 | Not Available | Negative | 2063821 - 2064291 | 16516.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
