Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic pyrophosphatase | EDC56_1834 | Not Available | Positive | 2046594 - 2047127 | 19325.2 |
| hypothetical protein | EDC56_1835 | Not Available | Positive | 2047452 - 2048063 | 22777.1 |
| valine-pyruvate aminotransferase | EDC56_1836 | Not Available | Negative | 2048139 - 2049398 | 46432.3 |
| uncharacterized protein duf695 | EDC56_1837 | Not Available | Negative | 2049558 - 2050025 | 17703.8 |
| regulatory luxr family protein | EDC56_1838 | Not Available | Positive | 2050299 - 2051468 | 43352.4 |
| cob(i)alamin adenosyltransferase | EDC56_1839 | Not Available | Negative | 2051600 - 2052208 | 22611.8 |
| molecular chaperone ibpa | EDC56_1840 | Not Available | Positive | 2052535 - 2052969 | 16331.5 |
| steroid delta-isomerase | EDC56_1841 | Not Available | Negative | 2053053 - 2053409 | 12743.2 |
| diadenosine tetraphosphate (ap4a) hit family hydrolase | EDC56_1842 | Not Available | Negative | 2053653 - 2054072 | 15038.3 |
| 23s rrna (cytidine2498-2'-o)-methyltransferase | EDC56_1843 | Not Available | Negative | 2054135 - 2055211 | 40246.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
