Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinate-nucleotide adenylyltransferase | EDC56_1814 | Not Available | Negative | 2022765 - 2023445 | 25083.0 |
| glutamate-5-semialdehyde dehydrogenase | EDC56_1815 | Not Available | Negative | 2023426 - 2024682 | 44681.6 |
| transporter (cpa2 family) | EDC56_1816 | Not Available | Positive | 2025067 - 2026701 | 59279.2 |
| cation:h+ antiporter | EDC56_1817 | Not Available | Positive | 2026804 - 2027778 | 34455.3 |
| uncharacterized protein duf5062 | EDC56_1818 | Not Available | Negative | 2027862 - 2028122 | 9790.1 |
| stress responsive alpha/beta barrel protein | EDC56_1819 | Not Available | Negative | 2028233 - 2028679 | 16151.8 |
| hypothetical protein | EDC56_1820 | Not Available | Negative | 2028702 - 2028956 | 8694.49 |
| hypothetical protein | EDC56_1821 | Not Available | Negative | 2029001 - 2031568 | 94817.5 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | EDC56_1822 | Not Available | Negative | 2031755 - 2032360 | 21999.8 |
| udp-n-acetylmuramate: l-alanyl-gamma-d-glutamyl-meso-diaminopimelate ligase | EDC56_1823 | Not Available | Negative | 2032357 - 2033787 | 52114.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
