Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa mutase | EDC56_0105 | Not Available | Negative | 115879 - 118053 | 79145.5 |
| methylmalonyl-coa epimerase | EDC56_0106 | Not Available | Negative | 118236 - 118649 | 15056.1 |
| biotin carboxylase c-terminal domain-containing protein | EDC56_0107 | Not Available | Negative | 118758 - 121619 | 105660.0 |
| acetyl-coa carboxylase carboxyltransferase component | EDC56_0108 | Not Available | Negative | 121655 - 123382 | 62646.7 |
| para-aminobenzoate synthetase component 1 | EDC56_0109 | Not Available | Positive | 123814 - 125202 | 50971.3 |
| kdo2-lipid iv(a) lauroyltransferase | EDC56_0110 | Not Available | Positive | 125338 - 126222 | 34026.3 |
| phosphoserine phosphatase | EDC56_0111 | Not Available | Negative | 126274 - 126891 | 23390.1 |
| atp-dependent rna helicase dbpa | EDC56_0112 | Not Available | Negative | 126981 - 128360 | 50601.8 |
| lysr family cys regulon transcriptional activator | EDC56_0113 | Not Available | Negative | 128527 - 129501 | 36186.6 |
| arac-like dna-binding protein | EDC56_0114 | Not Available | Positive | 129890 - 130948 | 39953.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
