Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sukh superfamily protein | EDC56_1804 | Not Available | Negative | 2013706 - 2014116 | 15537.3 |
| lipoyl(octanoyl) transferase | EDC56_1805 | Not Available | Negative | 2014165 - 2014809 | 23495.3 |
| hypothetical protein | EDC56_1806 | Not Available | Negative | 2014847 - 2015119 | 9775.72 |
| d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6) | EDC56_1807 | Not Available | Negative | 2015361 - 2016539 | 42956.4 |
| rare lipoprotein a | EDC56_1808 | Not Available | Negative | 2016700 - 2017626 | 32857.5 |
| membrane-bound lytic murein transglycosylase b | EDC56_1809 | Not Available | Negative | 2017712 - 2018692 | 36468.2 |
| rod shape determining protein roda | EDC56_1810 | Not Available | Negative | 2018738 - 2019883 | 41467.9 |
| penicillin-binding protein 2 | EDC56_1811 | Not Available | Negative | 2019925 - 2021769 | 68910.8 |
| 23s rrna (pseudouridine1915-n3)-methyltransferase | EDC56_1812 | Not Available | Negative | 2021870 - 2022376 | 18672.9 |
| ribosome-associated protein | EDC56_1813 | Not Available | Negative | 2022346 - 2022684 | 12237.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
