Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| general secretion pathway protein d | EDC56_1784 | Not Available | Negative | 1996980 - 1999049 | 73542.1 |
| type ii secretion system protein c (gspc) | EDC56_1785 | Not Available | Negative | 1999042 - 1999965 | 33603.8 |
| oxaloacetate decarboxylase beta subunit | EDC56_1786 | Not Available | Negative | 2000367 - 2001671 | 44878.3 |
| oxaloacetate decarboxylase alpha subunit | EDC56_1787 | Not Available | Negative | 2001684 - 2003489 | 64796.5 |
| oxaloacetate decarboxylase gamma subunit | EDC56_1788 | Not Available | Negative | 2003547 - 2003804 | 9301.59 |
| pp_01742 | EDC56_1789 | Not Available | Positive | 2004042 - 2004998 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2005196 - 2005272 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2005481 - 2005557 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 2005785 - 2005861 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2005934 - 2006023 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
