Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit a | EDC56_1674 | Not Available | Positive | 1892771 - 1894228 | 51702.4 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit b | EDC56_1675 | Not Available | Positive | 1894238 - 1895686 | 52673.5 |
| hypothetical protein | EDC56_1676 | Not Available | Positive | 1895779 - 1896072 | 11251.3 |
| atp-dependent rna helicase csda | EDC56_1677 | Not Available | Positive | 1896542 - 1898353 | 67422.0 |
| hypothetical protein | EDC56_1678 | Not Available | Negative | 1898444 - 1898746 | 11466.8 |
| dna-3-methyladenine glycosylase i | EDC56_1679 | Not Available | Negative | 1898925 - 1899605 | 25552.8 |
| hypothetical protein | EDC56_1680 | Not Available | Positive | 1899820 - 1901616 | 64446.8 |
| 8-oxo-dgtp pyrophosphatase mutt (nudix family) | EDC56_1681 | Not Available | Negative | 1901696 - 1902259 | 21114.1 |
| glycine dehydrogenase | EDC56_1682 | Not Available | Positive | 1902478 - 1905381 | 105502.0 |
| acetyltransferase (gnat) family protein | EDC56_1683 | Not Available | Positive | 1905569 - 1906054 | 18241.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
