Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-guanidinobutyraldehyde dehydrogenase/nad-dependent aldehyde dehydrogenase | EDC56_1664 | Not Available | Positive | 1880428 - 1882032 | 57249.6 |
| hypothetical protein | EDC56_1665 | Not Available | Negative | 1882159 - 1882686 | 19938.5 |
| hypothetical protein | EDC56_1666 | Not Available | Positive | 1882688 - 1882999 | 11924.3 |
| uncharacterized protein (tigr02099 family) | EDC56_1667 | Not Available | Negative | 1883083 - 1887072 | 145240.0 |
| ribonuclease g | EDC56_1668 | Not Available | Negative | 1887106 - 1888578 | 55505.4 |
| septum formation protein | EDC56_1669 | Not Available | Negative | 1888690 - 1889295 | 21959.4 |
| rod shape-determining protein mred | EDC56_1670 | Not Available | Negative | 1889298 - 1889780 | 18265.3 |
| rod shape-determining protein mrec | EDC56_1671 | Not Available | Negative | 1889777 - 1890658 | 31869.8 |
| rod shape-determining protein mreb | EDC56_1672 | Not Available | Negative | 1890838 - 1891875 | 37045.7 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | EDC56_1673 | Not Available | Positive | 1892333 - 1892683 | 13014.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
