Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding marr family transcriptional regulator | EDC56_1654 | Not Available | Positive | 1867012 - 1868160 | 43530.1 |
| 3-methylcrotonyl-coa carboxylase alpha subunit | EDC56_1655 | Not Available | Negative | 1868226 - 1870244 | 73980.1 |
| methylglutaconyl-coa hydratase | EDC56_1656 | Not Available | Negative | 1870237 - 1871070 | 30325.6 |
| 3-methylcrotonyl-coa carboxylase beta subunit | EDC56_1657 | Not Available | Negative | 1871103 - 1872713 | 58254.1 |
| isovaleryl-coa dehydrogenase | EDC56_1658 | Not Available | Negative | 1872717 - 1873871 | 41836.3 |
| lema protein | EDC56_1659 | Not Available | Positive | 1874067 - 1874663 | 21833.2 |
| zn-dependent protease with chaperone function | EDC56_1660 | Not Available | Positive | 1874738 - 1876615 | 68817.5 |
| spovk/ycf46/vps4 family aaa+-type atpase | EDC56_1661 | Not Available | Positive | 1876643 - 1878124 | 55599.8 |
| cyclohexadienyl dehydratase | EDC56_1662 | Not Available | Negative | 1878292 - 1879002 | 26609.9 |
| agmatinase | EDC56_1663 | Not Available | Negative | 1879279 - 1880190 | 33270.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
