Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane beta-barrel protein | EDC56_1633 | Not Available | Negative | 1841816 - 1842442 | 23221.0 |
| sh3 domain-containing protein | EDC56_1634 | Not Available | Negative | 1842412 - 1843203 | 29530.9 |
| degv family protein with edd domain | EDC56_1635 | Not Available | Positive | 1843823 - 1844767 | 34924.2 |
| magnesium transporter | EDC56_1636 | Not Available | Negative | 1844896 - 1846143 | 45118.3 |
| nlpe-like protein | EDC56_1637 | Not Available | Positive | 1846851 - 1848023 | 43518.1 |
| phosphonate transport system substrate-binding protein | EDC56_1638 | Not Available | Positive | 1848118 - 1848930 | 30628.6 |
| glycine betaine transporter | EDC56_1639 | Not Available | Negative | 1848976 - 1850454 | 53170.6 |
| molecular chaperone dnak (hsp70) | EDC56_1640 | Not Available | Negative | 1850644 - 1852482 | 66241.3 |
| uncharacterized protein duf2760 | EDC56_1641 | Not Available | Negative | 1852479 - 1852994 | 18283.9 |
| alkyl hydroperoxide reductase subunit f | EDC56_1642 | Not Available | Positive | 1853304 - 1854896 | 57242.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
