Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinoprotein glucose dehydrogenase/quinate dehydrogenase (quinone) | EDC56_1613 | Not Available | Positive | 1815277 - 1817241 | 71342.3 |
| aldehyde dehydrogenase (nad+) | EDC56_1614 | Not Available | Positive | 1817345 - 1818763 | 52201.9 |
| signal transduction histidine kinase | EDC56_1615 | Not Available | Negative | 1818821 - 1820128 | 49098.2 |
| dna-binding response ompr family regulator | EDC56_1616 | Not Available | Negative | 1820118 - 1820789 | 24774.1 |
| heptose-i-phosphate ethanolaminephosphotransferase | EDC56_1617 | Not Available | Positive | 1820992 - 1822698 | 65291.5 |
| beta-glucuronidase | EDC56_1618 | Not Available | Negative | 1822713 - 1824806 | 78968.6 |
| hypothetical protein | EDC56_1619 | Not Available | Negative | 1824927 - 1826819 | 71755.0 |
| uncharacterized protein duf4573 | EDC56_1620 | Not Available | Negative | 1826967 - 1830449 | 125785.0 |
| hypothetical protein | EDC56_1621 | Not Available | Negative | 1830656 - 1831570 | 33491.1 |
| biopolymer transport protein exbd | EDC56_1622 | Not Available | Negative | 1831572 - 1832096 | 19041.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
