Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication dna-binding protein kfra | EDC56_0085 | Not Available | Positive | 93331 - 94416 | 41149.1 |
| acetyltransferase | EDC56_0086 | Not Available | Negative | 94413 - 96815 | 87277.3 |
| acetoin utilization deacetylase acuc-like enzyme | EDC56_0087 | Not Available | Positive | 96882 - 97808 | 34317.8 |
| uncharacterized protein duf1800 | EDC56_0088 | Not Available | Positive | 98008 - 99807 | 66667.7 |
| uncharacterized protein (duf1501 family) | EDC56_0089 | Not Available | Positive | 99812 - 101185 | 50335.9 |
| thioesterase domain-containing protein | EDC56_0090 | Not Available | Negative | 101182 - 101652 | 17429.0 |
| alanine racemase | EDC56_0091 | Not Available | Negative | 101779 - 102864 | 39449.6 |
| d-alanine transaminase | EDC56_0092 | Not Available | Negative | 102931 - 103788 | 31152.1 |
| uncharacterized protein duf4392 | EDC56_0093 | Not Available | Negative | 103846 - 104715 | 31085.3 |
| biotin-dependent carboxylase-like uncharacterized protein | EDC56_0094 | Not Available | Negative | 104752 - 105687 | 33263.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
