Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase-4 | EDC56_1603 | Not Available | Negative | 1805500 - 1806579 | 40412.8 |
| hypothetical protein | EDC56_1604 | Not Available | Positive | 1806731 - 1807144 | 15594.8 |
| hypothetical protein | EDC56_1605 | Not Available | Negative | 1807197 - 1807493 | 11666.7 |
| at-hook transcription factor | EDC56_1606 | Not Available | Positive | 1807855 - 1808847 | 33658.7 |
| dna-binding csgd family transcriptional regulator | EDC56_1607 | Not Available | Negative | 1808924 - 1810048 | 41744.3 |
| 4-hydroxy-2-oxovalerate/4-hydroxy-2- oxohexanoate aldolase | EDC56_1608 | Not Available | Negative | 1810296 - 1811324 | 36447.2 |
| acetaldehyde dehydrogenase | EDC56_1609 | Not Available | Negative | 1811340 - 1812254 | 32271.3 |
| 2-oxopent-4-enoate/cis-2-oxohex-4-enoate hydratase | EDC56_1610 | Not Available | Negative | 1812351 - 1813136 | 28146.8 |
| 4,5:9,10-diseco-3-hydroxy-5,9, 17-trioxoandrosta-1(10),2-diene-4-oate hydrolase | EDC56_1611 | Not Available | Negative | 1813203 - 1814036 | 31020.5 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDC56_1612 | Not Available | Negative | 1814102 - 1814965 | 30287.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
