Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | EDC56_1583 | Not Available | Positive | 1788207 - 1788986 | 26908.1 |
| acyl-coa thioesterase fadm | EDC56_1584 | Not Available | Positive | 1789069 - 1789500 | 16008.1 |
| dna-binding csgd family transcriptional regulator | EDC56_1585 | Not Available | Positive | 1789624 - 1790781 | 42706.2 |
| hypothetical protein | EDC56_1586 | Not Available | Negative | 1790838 - 1791191 | 13532.1 |
| nucleoid-associated protein | EDC56_1587 | Not Available | Positive | 1791481 - 1792461 | 37120.5 |
| dna-binding marr family transcriptional regulator | EDC56_1588 | Not Available | Positive | 1792461 - 1792955 | 18004.9 |
| 3,4-dihydroxy-9,10-secoandrosta-1,3, 5(10)-triene-9,17-dione 4,5-dioxygenase | EDC56_1589 | Not Available | Negative | 1793055 - 1793954 | 33219.4 |
| dna-binding csgd family transcriptional regulator | EDC56_1590 | Not Available | Negative | 1794234 - 1795475 | 46002.0 |
| c-di-gmp-binding flagellar brake protein ycgr | EDC56_1591 | Not Available | Negative | 1795553 - 1796269 | 26168.8 |
| putative aminopeptidase | EDC56_1592 | Not Available | Negative | 1796311 - 1797375 | 40310.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
