Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | EDC56_1553 | Not Available | Negative | 1756830 - 1757489 | 24107.0 |
| cytochrome p450 | EDC56_1554 | Not Available | Positive | 1757690 - 1759087 | 52716.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | EDC56_1555 | Not Available | Negative | 1759104 - 1759409 | 11474.8 |
| hypothetical protein | EDC56_1556 | Not Available | Negative | 1759502 - 1759726 | 8307.75 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | EDC56_1557 | Not Available | Positive | 1760098 - 1761015 | 34010.5 |
| murein dd-endopeptidase | EDC56_1558 | Not Available | Positive | 1761452 - 1762861 | 52824.1 |
| hypothetical protein | EDC56_1559 | Not Available | Negative | 1762927 - 1763145 | 8117.55 |
| trna pseudouridine32 synthase/23s rrna pseudouridine746 synthase | EDC56_1560 | Not Available | Positive | 1763209 - 1764168 | 37064.5 |
| 16s rrna pseudouridine516 synthase | EDC56_1561 | Not Available | Positive | 1764233 - 1764949 | 27014.3 |
| putative mfs family arabinose efflux permease | EDC56_1562 | Not Available | Negative | 1764964 - 1766175 | 44241.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
