Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | EDC56_1543 | Not Available | Positive | 1723594 - 1725756 | 80983.5 |
| putrescine:ornithine antiporter (apa family) | EDC56_1544 | Not Available | Positive | 1725830 - 1727155 | 46256.0 |
| uncharacterized protein (tigr02246 family) | EDC56_1545 | Not Available | Negative | 1727312 - 1727677 | 13970.3 |
| dihydroorotase | EDC56_1546 | Not Available | Negative | 1727835 - 1729169 | 49188.4 |
| phosphoribosyl-amp cyclohydrolase | EDC56_1547 | Not Available | Negative | 1729166 - 1729591 | 15756.8 |
| fur family zinc uptake transcriptional regulator | EDC56_1548 | Not Available | Negative | 1729646 - 1730113 | 17340.0 |
| rna recognition motif-containing protein | EDC56_1549 | Not Available | Positive | 1730499 - 1730738 | 8453.24 |
| peptide deformylase | EDC56_1550 | Not Available | Negative | 1730833 - 1731363 | 19415.3 |
| putative cold-shock dna-binding protein | EDC56_1551 | Not Available | Negative | 1731611 - 1731814 | 7422.72 |
| putative ig domain-containing protein | EDC56_1552 | Not Available | Negative | 1732219 - 1756365 | 827798.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
