Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Spongiibacteraceae
Genus
Sinobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Spongiibacteraceae |
| Genus | Sinobacterium |
| Species | Sinobacterium caligoides |
| Strain | strain DSM 100316 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1169934 bp
Thymine Count
1030279 bp
Guanine Count
969416 bp
Cytosine Count
1228637 bp
Genome Length
4399319 bp
Protein-coding Genes
3773 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l35p | EDC56_1533 | Not Available | Negative | 1712722 - 1712916 | 7361.4 |
| translation initiation factor 3 (bif-3) | EDC56_1534 | Not Available | Negative | 1713005 - 1713565 | 21380.4 |
| threonyl-trna synthetase | EDC56_1535 | Not Available | Negative | 1713534 - 1715465 | 73320.2 |
| pas domain s-box-containing protein | EDC56_1536 | Not Available | Positive | 1715794 - 1717920 | 78099.3 |
| response regulator receiver domain-containing protein | EDC56_1537 | Not Available | Positive | 1717917 - 1719050 | 41650.4 |
| hd domain-containing protein | EDC56_1538 | Not Available | Positive | 1719040 - 1720185 | 42449.7 |
| uncharacterized protein yjik | EDC56_1539 | Not Available | Negative | 1720182 - 1721033 | 31784.4 |
| carotenoid cleavage dioxygenase | EDC56_1540 | Not Available | Positive | 1721382 - 1722854 | 55524.9 |
| hypothetical protein | EDC56_1541 | Not Available | Positive | 1722805 - 1723101 | 11294.4 |
| uncharacterized protein duf2618 | EDC56_1542 | Not Available | Positive | 1723211 - 1723330 | 4756.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
